#!/bin/sh

source ./sefunctions.sh

workflow=$1
touch taxogroups.txt

declare -a listtaxos=`ls results/panam_output/Similarity_annotation/Sorted_Sequences/`

for taxolong in ${listtaxos[@]}
do
	taxo=`echo $taxolong | cut -d"_" -f2-10` # Not really up to 10, but in case ...
	echo $taxo >> taxogroups.txt
done

